Homologous family i-nPHAscl (no lipase box) homologous family 3
Superfamily   Intracellular nPHAscl depolymerases (no lipase box) Proteins   60 Sequences   64 Structures   0 Links   Alignment [ annotated  clustalW ]   Tree [ rooted ] Sequences [ FASTA ] HMMER [ profile ]

Organism (rank: species)	Protein	Source DB	NCBI accession code	Description	DED/3D
Agrobacterium tumefaciens	intracellular PHB depolymerase	gb gi gi	AAK85840.2 159139461 159184124	intracellular PHB depolymerase [Agrobacterium tumefaciens str. C58]|intracellular PHB depolymerase [Agrobacterium tumefaciens str. C58]
Alpha proteobacterium BAL199	hypothetical protein	gb gi gi	EDP61834.1 159177275 163797526	hypothetical protein BAL199_23617 [alpha proteobacterium BAL199]|hypothetical protein BAL199_23617 [alpha proteobacterium BAL199]
Azorhizobium caulinodans	intracellular polyhydroxyalkanoate depolymerase	gi dbj gi	158426315 BAF90689.1 158333204	intracellular polyhydroxyalkanoate depolymerase [Azorhizobium caulinodans ORS 571]|intracellular polyhydroxyalkanoate depolymerase [Azorhizobium caulinodans ORS 571]
Beijerinckia indica	polyhydroxyalkanoate depolymerase, intracellular	gi gb gi	182680225 ACB96882.1 182636108	polyhydroxyalkanoate depolymerase, intracellular [Beijerinckia indica subsp. indica ATCC 9039]|polyhydroxyalkanoate depolymerase, intracellular [Beijerinckia indica subsp. indica ATCC 9039]
Bradyrhizobium japonicum	hypothetical protein	gi dbj gi	27376019 BAC46173.1 27349158	hypothetical protein blr0908 [Bradyrhizobium japonicum USDA 110]|blr0908 [Bradyrhizobium japonicum USDA 110]
Bradyrhizobium sp. BTAi1	putative intracellular PHB depolymerase	gb gi gi	ABQ39501.1 146410995 148258822	putative intracellular PHB depolymerase [Bradyrhizobium sp. BTAi1]|putative intracellular PHB depolymerase [Bradyrhizobium sp. BTAi1]
Bradyrhizobium sp. ORS278	putative intracellular PHB depolymerase	emb gi gi	CAL74458.1 146190459 146337653	putative intracellular PHB depolymerase [Bradyrhizobium sp. ORS278]|putative intracellular PHB depolymerase [Bradyrhizobium sp. ORS278]
Brevundimonas sp. BAL3	polyhydroxyalkanoate depolymerase, intracellular subfamily	gb gi	EDX79710.1 196184734	polyhydroxyalkanoate depolymerase, intracellular subfamily [Brevundimonas sp. BAL3]
Caulobacter sp. K31	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABZ73773.1 167351038 167648608	polyhydroxyalkanoate depolymerase, intracellular [Caulobacter sp. K31]|polyhydroxyalkanoate depolymerase, intracellular [Caulobacter sp. K31]
Caulobacter vibrioides	conserved hypothetical protein	gb gi gi	AAK22237.1 13421381 16124505	conserved hypothetical protein [Caulobacter crescentus CB15]|hypothetical protein CC_0250 [Caulobacter crescentus CB15]
Caulobacter vibrioides	intracellular PHB depolymerase	gb gi	AAL30172.1 16902310	intracellular PHB depolymerase [Caulobacter crescentus]
Erythrobacter litoralis	hypothetical protein	gb gi gi	ABC64508.1 84788326 85375243	hypothetical protein ELI_12080 [Erythrobacter litoralis HTCC2594]|hypothetical protein ELI_12080 [Erythrobacter litoralis HTCC2594]
Erythrobacter sp. NAP1	hypothetical protein	gb gi gi	EAQ28720.1 85688716 85710006	hypothetical protein NAP1_14013 [Erythrobacter sp. NAP1]|hypothetical protein NAP1_14013 [Erythrobacter sp. NAP1]
Erythrobacter sp. SD-21	hypothetical protein	gb gi gi	EDL49504.1 148831070 149184959	hypothetical protein ED21_17937 [Erythrobacter sp. SD-21]|hypothetical protein ED21_17937 [Erythrobacter sp. SD-21]
Hoeflea phototrophica	hypothetical protein	gb gi gi	EDQ35301.1 162285019 163757517	hypothetical protein HPDFL43_18942 [Hoeflea phototrophica DFL-43]|hypothetical protein HPDFL43_18942 [Hoeflea phototrophica DFL-43]
Hyphomonas neptunium	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABI78544.1 114740419 114800245	polyhydroxyalkanoate depolymerase, intracellular [Hyphomonas neptunium ATCC 15444]|polyhydroxyalkanoate depolymerase, intracellular [Hyphomonas neptunium ATCC 15444]
Magnetospirillum magnetotacticum	COG4553: Poly-beta-hydroxyalkanoate depolymerase	gi	23012462	COG4553: Poly-beta-hydroxyalkanoate depolymerase [Magnetospirillum magnetotacticum MS-1]
Maricaulis maris	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABI67147.1 114341867 114571405	polyhydroxyalkanoate depolymerase, intracellular [Maricaulis maris MCS10]|polyhydroxyalkanoate depolymerase, intracellular [Maricaulis maris MCS10]
Mesorhizobium loti	intracellular PHB depolymerase	dbj gi gi	BAB51181.1 14024578 13473827	intracellular PHB depolymerase [Mesorhizobium loti MAFF303099]|intracellular PHB depolymerase [Mesorhizobium loti MAFF303099]
Mesorhizobium sp. BNC1	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABG62085.1 110284026 110633042	polyhydroxyalkanoate depolymerase, intracellular [Mesorhizobium sp. BNC1]|polyhydroxyalkanoate depolymerase, intracellular [Mesorhizobium sp. BNC1]
Methylobacterium chloromethanicum	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDO20644.1 156188444 156452837	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium chloromethanicum CM4]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium chloromethanicum CM4]
Methylobacterium chloromethanicum	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDO24304.1 156192119 156448603	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium chloromethanicum CM4]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium chloromethanicum CM4]
Methylobacterium extorquens	intracellular PHB depolymerase	gb gi gb gi gi	AAQ95634.1 37623942 ABY32574.1 163665207 163853602	intracellular PHB depolymerase [Methylobacterium extorquens] polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium extorquens PA1]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium extorquens PA1]
Methylobacterium extorquens	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi gb gi	ABY29008.1 163661641 163850036 AAK11541.1 13021738	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium extorquens PA1]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium extorquens PA1] intracellular PHB depolymerase [Methylobacterium extorquens]
Methylobacterium nodulans	intracellular PHB depolymerase	gb gi gi	EDQ39437.1 162428795 163705779	intracellular PHB depolymerase [Methylobacterium nodulans ORS 2060]|intracellular PHB depolymerase [Methylobacterium nodulans ORS 2060]
Methylobacterium nodulans	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDQ43775.1 162433185 163700447	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium nodulans ORS 2060]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium nodulans ORS 2060]
Methylobacterium nodulans	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDQ39282.1 162428635 163705988	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium nodulans ORS 2060]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium nodulans ORS 2060]
Methylobacterium populi	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi gi gb gi	EDO75832.1 157409836 163806414 188579837 ACB78747.1 179343335	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001] polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]
Methylobacterium populi	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi gi gb gi	EDO72660.1 157406655 163809873 188583908 ACB82818.1 179347406	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium populi BJ001]
Methylobacterium radiotolerans	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ACB26331.1 170657276 170750754	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium radiotolerans JCM 2831]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium radiotolerans JCM 2831]
Methylobacterium sp. 4-46	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ACA19217.1 168197270 170742996	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]
Methylobacterium sp. 4-46	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ACA15594.1 168193647 170739373	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]
Methylobacterium sp. 4-46	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ACA19046.1 168197099 170742825	polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]|polyhydroxyalkanoate depolymerase, intracellular [Methylobacterium sp. 4-46]
Methylocella silvestris	polyhydroxyalkanoate depolymerase, intracellular	gi gb gi	177676683 EDT55360.1 172069250	polyhydroxyalkanoate depolymerase, intracellular [Methylocella silvestris BL2]|polyhydroxyalkanoate depolymerase, intracellular [Methylocella silvestris BL2]
Nitrobacter hamburgensis	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABE61129.1 91798754 92115860	polyhydroxyalkanoate depolymerase, intracellular [Nitrobacter hamburgensis X14]|polyhydroxyalkanoate depolymerase, intracellular [Nitrobacter hamburgensis X14]
Nitrobacter sp. Nb-311A	polyhydroxyalkanoate depolymerase	gb gi gi	EAQ36984.1 85699116 85713990	polyhydroxyalkanoate depolymerase [Nitrobacter sp. Nb-311A]|polyhydroxyalkanoate depolymerase [Nitrobacter sp. Nb-311A]
Nitrobacter winogradskyi	polyhydroxyalkanoate depolymerase	gb gi gi	ABA03398.1 74419199 75674329	polyhydroxyalkanoate depolymerase [Nitrobacter winogradskyi Nb-255]|polyhydroxyalkanoate depolymerase [Nitrobacter winogradskyi Nb-255]
Novosphingobium aromaticivorans	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABD27617.1 87136875 87201194	polyhydroxyalkanoate depolymerase, intracellular [Novosphingobium aromaticivorans DSM 12444]|polyhydroxyalkanoate depolymerase, intracellular [Novosphingobium aromaticivorans DSM 12444]
Oceanicaulis alexandrii	hypothetical protein	gb gi gi	EAP89480.1 83851625 83944843	hypothetical protein OA2633_09449 [Oceanicaulis alexandrii HTCC2633]|hypothetical protein OA2633_09449 [Oceanicaulis alexandrii HTCC2633]
Oligotropha carboxidovorans	polyhydroxyalkanoate depolymerase, intracellular	gi gi gb gi	197206026 197787281 EDT28518.1 170787474	polyhydroxyalkanoate depolymerase, intracellular [Oligotropha carboxidovorans OM5] polyhydroxyalkanoate depolymerase, intracellular [Oligotropha carboxidovorans OM5]|polyhydroxyalkanoate depolymerase, intracellular [Oligotropha carboxidovorans OM5]
Parvibaculum lavamentivorans	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABS61635.1 154154418 154250468	polyhydroxyalkanoate depolymerase, intracellular [Parvibaculum lavamentivorans DS-1]|polyhydroxyalkanoate depolymerase, intracellular [Parvibaculum lavamentivorans DS-1]
Parvularcula bermudensis	hypothetical protein	gb gi gi	EAQ17245.1 84691405 84702159	hypothetical protein PB2503_04337 [Parvularcula bermudensis HTCC2503]|hypothetical protein PB2503_04337 [Parvularcula bermudensis HTCC2503]
Phenylobacterium zucineum	polyhydroxyalkanoate depolymerase, intracellular	gi gb gi	197103695 ACG76643.1 196477115	polyhydroxyalkanoate depolymerase, intracellular [Phenylobacterium zucineum HLK1]|polyhydroxyalkanoate depolymerase, intracellular [Phenylobacterium zucineum HLK1]
Rhizobium etli	probable intracellular PHB depolymerase protein	gb gi gi	ABC88850.1 86279787 86355685	probable intracellular PHB depolymerase protein [Rhizobium etli CFN 42]|probable intracellular PHB depolymerase protein [Rhizobium etli CFN 42]
Rhizobium etli	probable intracellular PHB depolymerase protein	gi gb gi	190889657 ACE89021.1 190694936	probable intracellular PHB depolymerase protein [Rhizobium etli CIAT 652]|probable intracellular PHB depolymerase protein [Rhizobium etli CIAT 652]
Rhizobium leguminosarum	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDS64887.1 169084161 169201499	polyhydroxyalkanoate depolymerase, intracellular [Rhizobium leguminosarum bv. trifolii WSM2304]|polyhydroxyalkanoate depolymerase, intracellular [Rhizobium leguminosarum bv. trifolii WSM2304]
Rhizobium leguminosarum	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	EDR80156.1 167076352 167356836	polyhydroxyalkanoate depolymerase, intracellular [Rhizobium leguminosarum bv. trifolii WSM1325]|polyhydroxyalkanoate depolymerase, intracellular [Rhizobium leguminosarum bv. trifolii WSM1325]
Rhizobium leguminosarum	putative PHB depolymerase	emb gi gi	CAK05505.1 115254431 116249783	putative PHB depolymerase [Rhizobium leguminosarum bv. viciae 3841]|putative PHB depolymerase [Rhizobium leguminosarum bv. viciae 3841]
Rhodopseudomonas palustris	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABD85931.1 90103894 90421880	polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisB18]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisB18]
Rhodopseudomonas palustris	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABD04775.1 86570218 86747190	polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris HaA2]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris HaA2]
Rhodopseudomonas palustris	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABJ04185.1 115516201 115522254	polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisA53]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisA53]
Rhodopseudomonas palustris	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABE37366.1 91681064 91974608	polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisB5]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris BisB5]
Rhodopseudomonas palustris	putative intracellular PHB depolymerase	emb gi gi gb gi gi gi gb gi	CAE26019.1 39647498 39933652 EDR69587.1 167065252 167367606 192289008 ACE99137.1 192282757	putative intracellular PHB depolymerase [Rhodopseudomonas palustris CGA009]|putative intracellular PHB depolymerase [Rhodopseudomonas palustris CGA009]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris TIE-1]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris TIE-1]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris TIE-1]|polyhydroxyalkanoate depolymerase, intracellular [Rhodopseudomonas palustris TIE-1]
Saccharophagus degradans	hypothetical protein	gi gb gi	90021520 ABD81135.1 89951120	hypothetical protein Sde_1875 [Saccharophagus degradans 2-40]|polyhydroxyalkanoate depolymerase, intracellular [Saccharophagus degradans 2-40]
Sinorhizobium medicae	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABR62057.1 150029940 150398425	polyhydroxyalkanoate depolymerase, intracellular [Sinorhizobium medicae WSM419]|polyhydroxyalkanoate depolymerase, intracellular [Sinorhizobium medicae WSM419]
Sinorhizobium meliloti	CONSERVED HYPOTHETICAL PROTEIN	emb gi gi	CAC41411.1 15072952 15963777	CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]|hypothetical protein SMc02770 [Sinorhizobium meliloti 1021]
Sphingomonas wittichii	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABQ67013.1 148498759 148553569	polyhydroxyalkanoate depolymerase, intracellular [Sphingomonas wittichii RW1]|polyhydroxyalkanoate depolymerase, intracellular [Sphingomonas wittichii RW1]
Sphingopyxis alaskensis	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABF53695.1 98977544 103487467	polyhydroxyalkanoate depolymerase, intracellular [Sphingopyxis alaskensis RB2256]|polyhydroxyalkanoate depolymerase, intracellular [Sphingopyxis alaskensis RB2256]
Uncultured Acidobacteria bacterium	putative intracellular PHB depolymerase	gb gi	AAP58508.1 31789392	putative intracellular PHB depolymerase [uncultured Acidobacteria bacterium]
Xanthobacter autotrophicus	polyhydroxyalkanoate depolymerase, intracellular	gb gi gi	ABS65562.1 154158346 154244261	polyhydroxyalkanoate depolymerase, intracellular [Xanthobacter autotrophicus Py2]|polyhydroxyalkanoate depolymerase, intracellular [Xanthobacter autotrophicus Py2]